Package: optRF 1.2.0
optRF: Optimising Random Forest Stability by Determining the Optimal Number of Trees
Calculating the stability of random forest with certain numbers of trees. The non-linear relationship between stability and numbers of trees is described using a logistic regression model and used to estimate the optimal number of trees.
Authors:
optRF_1.2.0.tar.gz
optRF_1.2.0.zip(r-4.5)optRF_1.2.0.zip(r-4.4)optRF_1.2.0.zip(r-4.3)
optRF_1.2.0.tgz(r-4.5-any)optRF_1.2.0.tgz(r-4.4-any)optRF_1.2.0.tgz(r-4.3-any)
optRF_1.2.0.tar.gz(r-4.5-noble)optRF_1.2.0.tar.gz(r-4.4-noble)
optRF_1.2.0.tgz(r-4.4-emscripten)optRF_1.2.0.tgz(r-4.3-emscripten)
optRF.pdf |optRF.html✨
optRF/json (API)
NEWS
| # Install 'optRF' in R: |
| install.packages('optRF', repos = c('https://tmlange.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/tmlange/optrf/issues
- SNPdata - Simulated data of wheat yield and genomic markers
Last updated 14 hours agofrom:35e3f9bea2. Checks:9 OK. Indexed: yes.
| Target | Result | Latest binary |
|---|---|---|
| Doc / Vignettes | OK | Apr 01 2025 |
| R-4.5-win | OK | Apr 01 2025 |
| R-4.5-mac | OK | Apr 01 2025 |
| R-4.5-linux | OK | Apr 01 2025 |
| R-4.4-win | OK | Apr 01 2025 |
| R-4.4-mac | OK | Apr 01 2025 |
| R-4.4-linux | OK | Apr 01 2025 |
| R-4.3-win | OK | Apr 01 2025 |
| R-4.3-mac | OK | Apr 01 2025 |
Exports:estimate_numtreesestimate_stabilitymeasure_stabilityopt_importanceopt_predictionplot_stability
Dependencies:irrlatticelpSolveMatrixminpack.lmrangerRcppRcppEigen
Optimising random forest for prediction based decision-making processes
Rendered fromopt_prediction.Rmdusingknitr::rmarkdownon Apr 01 2025.Last update: 2025-04-01
Started: 2025-01-31
Optimising random forest for variable selection
Rendered fromopt_importance.Rmdusingknitr::rmarkdownon Apr 01 2025.Last update: 2025-04-01
Started: 2025-01-31
Optimising random forest using optRF
Rendered fromoptRF.Rmdusingknitr::rmarkdownon Apr 01 2025.Last update: 2025-04-01
Started: 2025-01-31
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Estimate the required number of trees | estimate_numtrees |
| Estimate the stability of random forest | estimate_stability |
| Measure the stability of random forest | measure_stability |
| Optimise random forest for estimation of variable importance | opt_importance |
| Optimise random forest for prediction | opt_prediction |
| Plot random forest stability | plot_stability |
| Simulated data of wheat yield and genomic markers | SNPdata |
